BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A04LP1|AL428144
(1019 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1525 1251 0.0
>3x_Contig1525
Length = 8924
Score = 1251 bits (630), Expect = 0.0
Identities = 631/632 (99%)
Strand = Plus / Minus
Query: 1 atcagcaaccctcgatttctggtacaactccggtaacatttttaaagatatttgaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atcagcaaccctcgatttctggtacaactccggtaacatttttaaagatatttgaagttc 573
Query: 61 ctcgccgtccacaagttctcttgcttggattgaatcagagaattcatcgagtttcgatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctcgccgtccacaagttctcttgcttggattgaatcagagaattcatcgagtttcgatat 513
Query: 121 catatatttcacattgaattgaggtttcttcacggtccgaagccttccaatggaatgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 catatatttcacattgaattgaggtttcttcacggtccgaagccttccaatggaatgaaa 453
Query: 181 gagtctctttgtgaccattatgtaaaacgtttgggttgttatgaatgtaggtaactactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gagtctctttgtgaccattatgtaaaacgtttgggttgttatgaatgtaggtaactactg 393
Query: 241 tctagtagatataagctgtaacttgagattactgtctggattctttcatttttattggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tctagtagatataagctgtaacttgagattactgtctggattctttcatttttattggac 333
Query: 301 tttaacgcttatgggccacataacttttagatttcctttaaaagtgtctcgaacaaaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tttaacgcttatgggccacataacttttagatttcctttaaaagtgtctcgaacaaaggt 273
Query: 361 agtgtttgttgatggatttcaaaatcgatcggactgcataaacagactggaaaacttgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agtgtttgttgatggatttcaaaatcgatcggactgcataaacagactggaaaacttgca 213
Query: 421 gagtacaaatgaaatatatggttgaraattgactaattaggtttacatgcagctatttag 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 212 gagtacaaatgaaatatatggttgaaaattgactaattaggtttacatgcagctatttag 153
Query: 481 cttagaagttcaacttagtgaagaaccattggttcttaccagcttgatgtctttcttcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cttagaagttcaacttagtgaagaaccattggttcttaccagcttgatgtctttcttcaa 93
Query: 541 aggccttcttgataaccttcttggcttcttctctttgagatggttcttcgaaagtttcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 aggccttcttgataaccttcttggcttcttctctttgagatggttcttcgaaagtttcag 33
Query: 601 tggagacgacgctcttgaaagcttcaacatcc 632
||||||||||||||||||||||||||||||||
Sbjct: 32 tggagacgacgctcttgaaagcttcaacatcc 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7763
Number of Sequences: 1807
Number of extensions: 7763
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 1019
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1003
effective length of database: 10,329,639
effective search space: 10360627917
effective search space used: 10360627917
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)